STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_4764Enoyl-CoA hydratase/carnithine racemase; Function of strongly homologous gene; enzyme. (260 aa)    
Predicted Functional Partners:
XM1_4763
Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta); Function of strongly homologous gene; enzyme.
 
 0.990
XM1_4766
Hydroxymethylglutaryl-CoA lyase, mitochondrial; Function of strongly homologous gene; enzyme.
 0.978
HMGCL
Hydroxymethylglutaryl-CoA lyase, mitochondrial; Function of strongly homologous gene; putative enzyme.
 0.976
XM1_4765
Acetyl/propionyl-CoA carboxylase, alpha chain; Function of strongly homologous gene; enzyme.
 
 0.969
ivd
Acyl-CoA dehydrogenase/oxidase; Function of strongly homologous gene; enzyme.
 
 0.915
caiD
Enoyl-CoA hydratase/carnithine racemase; Function of strongly homologous gene; putative enzyme.
  
  
 
0.910
XM1_2265
Putative Enoyl-CoA hydratase/carnithine racemase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 
0.902
XM1_4762
3-hydroxyacyl-CoA dehydrogenase; Function of strongly homologous gene; enzyme.
  
    0.816
dch
Putative Cyclohexa-1,5-dienecarbonyl-CoA hydratase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.738
XM1_1692
Putative enoyl-CoA hydratase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.679
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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