STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_4783Putative serine/threonine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (596 aa)    
Predicted Functional Partners:
XM1_4782
Putative formate/nitrite transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
     0.956
XM1_2654
Putative Transketolase central region; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 0.929
XM1_2801
Homologs of previously reported genes of unknown function.
 
   0.750
XM1_2649
Putative ATPase (modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
0.731
XM1_3997
Putative serine/threonine kinase with signal transduction histidinekinase and gaf sensor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 0.731
XM1_4558
Putative histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 0.731
XM1_1041
Putative ribosomal RNA small subunit methyltransferase B; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
  
 
 0.727
XM1_1577
16S rRNA (cytosine967-C5)-methyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
  
 
 0.727
hoxX
Hydrogenase maturation factor HoxX; Function of homologous gene experimentally demonstrated in an other organism; factor; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
 0.724
XM1_3665
Suppressor protein SRP40; Function of strongly homologous gene; regulator.
    
 0.723
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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