KOY85173.1 protein (bacterium 3363) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

KOY85173.1

Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (254 aa)

Predicted Functional Partners:

KOY85171.1

0.784

KOY85174.1

0.784

KOY85172.1

0.773

fbp

0.757

KOY85255.1

0.752

KOY85170.1

0.613

KOY86578.1

0.590

KOY86145.1

0.481

KOY86769.1

0.458

Your Current Organism:

bacterium 3363

NCBI taxonomy Id: 1664068
Other names: b. 336/3, bacterium 336/3

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KOY85170.1	KOY85171.1	AD998_02490	AD998_02495	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.613
KOY85170.1	KOY85172.1	AD998_02490	AD998_02500	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.613
KOY85170.1	KOY85173.1	AD998_02490	AD998_02505	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.613
KOY85170.1	KOY85174.1	AD998_02490	AD998_02510	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.613
KOY85170.1	fbp	AD998_02490	AD998_02515	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FBPase class 1 family.	0.600
KOY85171.1	KOY85170.1	AD998_02495	AD998_02490	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.613
KOY85171.1	KOY85172.1	AD998_02495	AD998_02500	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.773
KOY85171.1	KOY85173.1	AD998_02495	AD998_02505	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.784
KOY85171.1	KOY85174.1	AD998_02495	AD998_02510	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.794
KOY85171.1	fbp	AD998_02495	AD998_02515	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FBPase class 1 family.	0.757
KOY85172.1	KOY85170.1	AD998_02500	AD998_02490	Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.613
KOY85172.1	KOY85171.1	AD998_02500	AD998_02495	Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.773
KOY85172.1	KOY85173.1	AD998_02500	AD998_02505	Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.773
KOY85172.1	KOY85174.1	AD998_02500	AD998_02510	Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.773
KOY85172.1	fbp	AD998_02500	AD998_02515	Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FBPase class 1 family.	0.757
KOY85173.1	KOY85170.1	AD998_02505	AD998_02490	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.613
KOY85173.1	KOY85171.1	AD998_02505	AD998_02495	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.784
KOY85173.1	KOY85172.1	AD998_02505	AD998_02500	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.773
KOY85173.1	KOY85174.1	AD998_02505	AD998_02510	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.784
KOY85173.1	KOY85255.1	AD998_02505	AD998_02975	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.752