STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOY88166.1Choline dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (536 aa)    
Predicted Functional Partners:
KOY87754.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.820
KOY85925.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.819
KOY86171.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.819
KOY86273.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.819
KOY87659.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.819
KOY86675.1
Carnitine dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CoA-transferase III family.
 
     0.801
KOY84869.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.754
KOY85844.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.754
KOY88092.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.754
KOY86236.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.754
Your Current Organism:
bacterium 3363
NCBI taxonomy Id: 1664068
Other names: b. 336/3, bacterium 336/3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.