STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BGLY_0896Hypothetical protein. (179 aa)    
Predicted Functional Partners:
yfkAB
Hypothetical protein.
  
    0.640
BGLY_3542
Hypothetical protein.
  
     0.634
BGLY_0848
Hypothetical protein.
  
     0.616
spoVIF
Sporulation-specific transcription factor SpoVIF.
  
    0.606
BGLY_2788
Hypothetical protein; Belongs to the HesB/IscA family.
  
     0.605
BGLY_1863
Coupling factor for flagellin transcription and translation.
  
     0.596
BGLY_0895
Hypothetical protein.
       0.586
fliJ
Flagellar biosynthesis chaperone.
  
     0.577
BGLY_1241
Hypothetical protein.
  
     0.562
BGLY_1250
Hypothetical protein.
  
     0.523
Your Current Organism:
Bacillus glycinifermentans
NCBI taxonomy Id: 1664069
Other names: B. glycinifermentans, Bacillus glycinifermentans Kim et al. 2015, Bacillus sp. GO-13, Bacillus sp. KJ-17, KACC 18425, NRRL B-65291, strain GO-13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.