STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bglC2Endo-1,4-beta-glucanase, glycoside hydrolase family 5. (516 aa)    
Predicted Functional Partners:
BGLY_1876
Glycoside hydrolase.
 
  
 0.971
celA
Glycoside hydrolase family protein.
 
 0.959
BGLY_4536
Glycosyl transferase family protein.
   
  0.946
BGLY_3934
Putative beta-hexosaminidase, putative lipoprotein.
 
  
 0.929
BGLY_3080
Hypothetical protein.
    
 0.910
BGLY_3081
Putative beta-hexosaminidase, putative lipoprotein.
    
 0.910
xynC
Glucuronoxylanase XynC; Belongs to the glycosyl hydrolase 30 family.
 
   
 0.800
BGLY_0590
Mannan endo-1,4-beta-mannosidase.
 
   
 0.785
celB
Glycoside hydrolase family protein.
 
  
 0.775
xynD
Arabinoxylan arabinofuranohydrolase; Belongs to the glycosyl hydrolase 43 family.
 
   
 0.770
Your Current Organism:
Bacillus glycinifermentans
NCBI taxonomy Id: 1664069
Other names: B. glycinifermentans, Bacillus glycinifermentans Kim et al. 2015, Bacillus sp. GO-13, Bacillus sp. KJ-17, KACC 18425, NRRL B-65291, strain GO-13
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.