STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
resETwo-component sensor histidine kinase ResE. (593 aa)    
Predicted Functional Partners:
resD
Transcriptional regulatory protein ResD.
 0.997
BGLY_3071
DNA-binding response regulator.
 0.979
BGLY_2340
Sensor histidine kinase KdpD.
 
 
 0.881
spaR
Response regulator.
 
 
 0.829
phoP
Alkaline phosphatase synthesis transcriptional regulatory protein PhoP.
 
 0.805
yycF
Transcriptional regulatory protein YycF.
 
 0.798
BGLY_1180
Two-component response regulator.
 
 0.792
yclJ
Putative transcriptional regulatory protein YclJ.
 
 0.758
bacT
DNA-binding response regulator.
 
 0.758
resC
ResC.
 
  
 0.750
Your Current Organism:
Bacillus glycinifermentans
NCBI taxonomy Id: 1664069
Other names: B. glycinifermentans, Bacillus glycinifermentans Kim et al. 2015, Bacillus sp. GO-13, Bacillus sp. KJ-17, KACC 18425, NRRL B-65291, strain GO-13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.