STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glcRDeoR family transcriptional regulator. (252 aa)    
Predicted Functional Partners:
BGLY_4266
Hypothetical protein.
  
  
 0.826
fruA
PTS system fructose-specific EIIABC component.
 
  
 0.755
manP
PTS system mannose-specific EIIBCA component.
 
  
 0.734
fruK
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.728
BGLY_4576
1-phosphofructokinase.
 
  
 0.696
pfkB
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.673
BGLY_4269
Sorbitol-6-phosphate dehydrogenase.
  
    0.627
BGLY_3940
PTS system fructose-specific transporter subunit IIABC.
 
  
 0.619
BGLY_4268
Transaldolase.
  
    0.618
BGLY_4272
Phosphotransferase enzyme II.
  
    0.584
Your Current Organism:
Bacillus glycinifermentans
NCBI taxonomy Id: 1664069
Other names: B. glycinifermentans, Bacillus glycinifermentans Kim et al. 2015, Bacillus sp. GO-13, Bacillus sp. KJ-17, KACC 18425, NRRL B-65291, strain GO-13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.