STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WN51_02267RNA-binding protein 5. (920 aa)    
Predicted Functional Partners:
WN51_10740
SURP and G-patch domain-containing protein 1.
   
0.935
WN51_06294
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 
0.922
WN51_08404
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15.
   
 0.902
WN51_08267
Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16.
   
 0.870
WN51_10529
G patch domain and KOW motifs-containing protein.
   
 
 0.852
WN51_11990
RNA helicase.
    
 0.810
WN51_03290
Nucleolar protein 6.
    
 
 0.773
WN51_07760
U3 small nucleolar RNA-associated protein 6 like protein.
    
 
 0.758
WN51_10460
Ribosomal RNA processing protein 36 like protein.
   
   0.752
WN51_08072
Nucleolar MIF4G domain-containing protein 1.
   
   0.752
Your Current Organism:
Melipona quadrifasciata
NCBI taxonomy Id: 166423
Other names: M. quadrifasciata
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