WN51_01479 protein (Melipona quadrifasciata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

WN51_01479

RRN7-type domain-containing protein. (734 aa)

Predicted Functional Partners:

WN51_00208

0.929

WN51_01702

0.926

WN51_12923

0.923

WN51_04252

0.806

WN51_11323

0.806

WN51_06006

0.685

WN51_03593

0.658

WN51_06863

0.631

WN51_06637

0.613

WN51_11523

0.613

Your Current Organism:

Melipona quadrifasciata

NCBI taxonomy Id: 166423
Other names: M. quadrifasciata

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
WN51_00208	WN51_01479	A0A0M9ABW0	A0A0M8ZW80	Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP.	RRN7-type domain-containing protein.	0.929
WN51_00208	WN51_01702	A0A0M9ABW0	A0A0N0U458	Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP.	Aspartate aminotransferase.	0.957
WN51_00208	WN51_04252	A0A0M9ABW0	A0A0M8ZR31	Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP.	Glutamate decarboxylase.	0.802
WN51_00208	WN51_06006	A0A0M9ABW0	A0A0N0BD18	Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP.	Asparagine synthetase [glutamine-hydrolyzing].	0.887
WN51_00208	WN51_06637	A0A0M9ABW0	A0A0M8ZT55	Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP.	Sphingosine-1-phosphate lyase.	0.796
WN51_00208	WN51_06863	A0A0M9ABW0	A0A0M8ZSW0	Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP.	Asparagine synthetase domain-containing protein 1.	0.816
WN51_00208	WN51_11323	A0A0M9ABW0	A0A0M9AB86	Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP.	Glutamate decarboxylase 1.	0.802
WN51_00208	WN51_11523	A0A0M9ABW0	A0A0N0BK06	Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP.	Putative aspartate aminotransferase, cytoplasmic.	0.885
WN51_00208	WN51_12923	A0A0M9ABW0	A0A0M9AAB9	Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP.	CAD protein.	0.966
WN51_01479	WN51_00208	A0A0M8ZW80	A0A0M9ABW0	RRN7-type domain-containing protein.	Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP.	0.929
WN51_01479	WN51_01702	A0A0M8ZW80	A0A0N0U458	RRN7-type domain-containing protein.	Aspartate aminotransferase.	0.926
WN51_01479	WN51_03593	A0A0M8ZW80	A0A0N0U3X8	RRN7-type domain-containing protein.	L-asparaginase.	0.658
WN51_01479	WN51_04252	A0A0M8ZW80	A0A0M8ZR31	RRN7-type domain-containing protein.	Glutamate decarboxylase.	0.806
WN51_01479	WN51_06006	A0A0M8ZW80	A0A0N0BD18	RRN7-type domain-containing protein.	Asparagine synthetase [glutamine-hydrolyzing].	0.685
WN51_01479	WN51_06637	A0A0M8ZW80	A0A0M8ZT55	RRN7-type domain-containing protein.	Sphingosine-1-phosphate lyase.	0.613
WN51_01479	WN51_06863	A0A0M8ZW80	A0A0M8ZSW0	RRN7-type domain-containing protein.	Asparagine synthetase domain-containing protein 1.	0.631
WN51_01479	WN51_11323	A0A0M8ZW80	A0A0M9AB86	RRN7-type domain-containing protein.	Glutamate decarboxylase 1.	0.806
WN51_01479	WN51_11523	A0A0M8ZW80	A0A0N0BK06	RRN7-type domain-containing protein.	Putative aspartate aminotransferase, cytoplasmic.	0.613
WN51_01479	WN51_12923	A0A0M8ZW80	A0A0M9AAB9	RRN7-type domain-containing protein.	CAD protein.	0.923
WN51_01702	WN51_00208	A0A0N0U458	A0A0M9ABW0	Aspartate aminotransferase.	Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP.	0.957