STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WN51_11812AT-rich interactive domain-containing protein 5B. (1647 aa)    
Predicted Functional Partners:
WN51_03228
Histone deacetylase complex subunit SAP30 like protein.
    
 0.691
WN51_14083
Lysine-specific demethylase 7.
     
 0.662
WN51_10030
Breast cancer metastasis-suppressor 1-like protein-A.
    
 0.655
WN51_12791
Sin3 histone deacetylase corepressor complex component SDS3.
    
 0.655
WN51_03188
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.652
WN51_13108
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.652
WN51_08047
Putative histone-binding protein Caf1.
    
 0.651
WN51_09056
Histone deacetylase 4.
    
 0.638
WN51_07949
PHD finger protein 20-like protein 1.
   
 0.630
WN51_14498
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1.
   
 
 0.627
Your Current Organism:
Melipona quadrifasciata
NCBI taxonomy Id: 166423
Other names: M. quadrifasciata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.