WN51_14384 protein (Melipona quadrifasciata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

WN51_14384

Uncharacterized protein. (567 aa)

Predicted Functional Partners:

WN51_09830

0.713

WN51_00777

0.596

WN51_10494

0.592

WN51_10176

0.589

WN51_07949

0.575

WN51_01983

0.567

WN51_09499

0.561

WN51_01536

0.553

WN51_10803

0.546

WN51_02042

0.543

Your Current Organism:

Melipona quadrifasciata

NCBI taxonomy Id: 166423
Other names: M. quadrifasciata

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
WN51_00777	WN51_01983	A0A0M8ZXC6	A0A0M9AAQ9	Suppressor of fused like protein.	Protein roadkill.	0.895
WN51_00777	WN51_09830	A0A0M8ZXC6	A0A0M9A6K7	Suppressor of fused like protein.	Leucine-rich repeat serine/threonine-protein kinase 1.	0.563
WN51_00777	WN51_14384	A0A0M8ZXC6	A0A0N0BFG9	Suppressor of fused like protein.	Uncharacterized protein.	0.596
WN51_01536	WN51_09499	A0A0M8ZY44	A0A0M9A6B8	Nuclear factor related to kappa-B-binding protein.	Lysine-specific demethylase 6A.	0.528
WN51_01536	WN51_10176	A0A0M8ZY44	A0A0N0BJI5	Nuclear factor related to kappa-B-binding protein.	Chromodomain-helicase-DNA-binding protein Mi-2 like protein.	0.629
WN51_01536	WN51_14384	A0A0M8ZY44	A0A0N0BFG9	Nuclear factor related to kappa-B-binding protein.	Uncharacterized protein.	0.553
WN51_01983	WN51_00777	A0A0M9AAQ9	A0A0M8ZXC6	Protein roadkill.	Suppressor of fused like protein.	0.895
WN51_01983	WN51_14384	A0A0M9AAQ9	A0A0N0BFG9	Protein roadkill.	Uncharacterized protein.	0.567
WN51_02042	WN51_09830	A0A0N0BKL2	A0A0M9A6K7	Ragulator complex protein LAMTOR2.	Leucine-rich repeat serine/threonine-protein kinase 1.	0.556
WN51_02042	WN51_14384	A0A0N0BKL2	A0A0N0BFG9	Ragulator complex protein LAMTOR2.	Uncharacterized protein.	0.543
WN51_07949	WN51_09499	A0A0M8ZNV1	A0A0M9A6B8	PHD finger protein 20-like protein 1.	Lysine-specific demethylase 6A.	0.895
WN51_07949	WN51_09830	A0A0M8ZNV1	A0A0M9A6K7	PHD finger protein 20-like protein 1.	Leucine-rich repeat serine/threonine-protein kinase 1.	0.840
WN51_07949	WN51_10176	A0A0M8ZNV1	A0A0N0BJI5	PHD finger protein 20-like protein 1.	Chromodomain-helicase-DNA-binding protein Mi-2 like protein.	0.990
WN51_07949	WN51_14384	A0A0M8ZNV1	A0A0N0BFG9	PHD finger protein 20-like protein 1.	Uncharacterized protein.	0.575
WN51_09499	WN51_01536	A0A0M9A6B8	A0A0M8ZY44	Lysine-specific demethylase 6A.	Nuclear factor related to kappa-B-binding protein.	0.528
WN51_09499	WN51_07949	A0A0M9A6B8	A0A0M8ZNV1	Lysine-specific demethylase 6A.	PHD finger protein 20-like protein 1.	0.895
WN51_09499	WN51_09830	A0A0M9A6B8	A0A0M9A6K7	Lysine-specific demethylase 6A.	Leucine-rich repeat serine/threonine-protein kinase 1.	0.841
WN51_09499	WN51_10176	A0A0M9A6B8	A0A0N0BJI5	Lysine-specific demethylase 6A.	Chromodomain-helicase-DNA-binding protein Mi-2 like protein.	0.515
WN51_09499	WN51_14384	A0A0M9A6B8	A0A0N0BFG9	Lysine-specific demethylase 6A.	Uncharacterized protein.	0.561
WN51_09830	WN51_00777	A0A0M9A6K7	A0A0M8ZXC6	Leucine-rich repeat serine/threonine-protein kinase 1.	Suppressor of fused like protein.	0.563