Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OBW46621.1 | barA_1 | AB671_01305 | AB671_00101 | Hypothetical protein. | Signal transduction histidine-protein kinase BarA. | 0.984 |
OBW46621.1 | barA_2 | AB671_01305 | AB671_02765 | Hypothetical protein. | Signal transduction histidine-protein kinase BarA. | 0.984 |
OBW46621.1 | luxQ_2 | AB671_01305 | AB671_02856 | Hypothetical protein. | Autoinducer 2 sensor kinase/phosphatase LuxQ. | 0.994 |
OBW46621.1 | ompR | AB671_01305 | AB671_03741 | Hypothetical protein. | Transcriptional regulatory protein OmpR. | 0.819 |
OBW46621.1 | yycG | AB671_01305 | AB671_02855 | Hypothetical protein. | Sensor histidine kinase YycG. | 0.897 |
OBW46621.1 | zraS_2 | AB671_01305 | AB671_03461 | Hypothetical protein. | Sensor protein ZraS. | 0.785 |
barA_1 | OBW46621.1 | AB671_00101 | AB671_01305 | Signal transduction histidine-protein kinase BarA. | Hypothetical protein. | 0.984 |
barA_1 | barA_2 | AB671_00101 | AB671_02765 | Signal transduction histidine-protein kinase BarA. | Signal transduction histidine-protein kinase BarA. | 0.999 |
barA_1 | bfmBAB_2 | AB671_00101 | AB671_02691 | Signal transduction histidine-protein kinase BarA. | 2-oxoisovalerate dehydrogenase subunit beta. | 0.863 |
barA_1 | luxQ_2 | AB671_00101 | AB671_02856 | Signal transduction histidine-protein kinase BarA. | Autoinducer 2 sensor kinase/phosphatase LuxQ. | 0.999 |
barA_1 | ompR | AB671_00101 | AB671_03741 | Signal transduction histidine-protein kinase BarA. | Transcriptional regulatory protein OmpR. | 0.981 |
barA_1 | pdhB | AB671_00101 | AB671_00473 | Signal transduction histidine-protein kinase BarA. | Pyruvate dehydrogenase E1 component subunit beta. | 0.863 |
barA_1 | pdhC_1 | AB671_00101 | AB671_00024 | Signal transduction histidine-protein kinase BarA. | Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex. | 0.732 |
barA_1 | yycG | AB671_00101 | AB671_02855 | Signal transduction histidine-protein kinase BarA. | Sensor histidine kinase YycG. | 0.999 |
barA_1 | zraS_2 | AB671_00101 | AB671_03461 | Signal transduction histidine-protein kinase BarA. | Sensor protein ZraS. | 0.999 |
barA_2 | OBW46621.1 | AB671_02765 | AB671_01305 | Signal transduction histidine-protein kinase BarA. | Hypothetical protein. | 0.984 |
barA_2 | barA_1 | AB671_02765 | AB671_00101 | Signal transduction histidine-protein kinase BarA. | Signal transduction histidine-protein kinase BarA. | 0.999 |
barA_2 | bfmBAB_2 | AB671_02765 | AB671_02691 | Signal transduction histidine-protein kinase BarA. | 2-oxoisovalerate dehydrogenase subunit beta. | 0.863 |
barA_2 | luxQ_2 | AB671_02765 | AB671_02856 | Signal transduction histidine-protein kinase BarA. | Autoinducer 2 sensor kinase/phosphatase LuxQ. | 0.999 |
barA_2 | ompR | AB671_02765 | AB671_03741 | Signal transduction histidine-protein kinase BarA. | Transcriptional regulatory protein OmpR. | 0.981 |
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