Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
mutL | pcrA | AB671_01378 | AB671_00793 | DNA mismatch repair protein MutL. | ATP-dependent DNA helicase PcrA. | 0.943 |
mutL | polA | AB671_01378 | AB671_04064 | DNA mismatch repair protein MutL. | DNA polymerase I. | 0.999 |
mutL | recA | AB671_01378 | AB671_02910 | DNA mismatch repair protein MutL. | Protein RecA. | 0.821 |
mutL | recG | AB671_01378 | AB671_01769 | DNA mismatch repair protein MutL. | ATP-dependent DNA helicase RecG. | 0.613 |
mutL | recQ_3 | AB671_01378 | AB671_03514 | DNA mismatch repair protein MutL. | ATP-dependent DNA helicase RecQ. | 0.842 |
mutL | sbcD | AB671_01378 | AB671_02030 | DNA mismatch repair protein MutL. | Nuclease SbcCD subunit D. | 0.663 |
mutL | topA | AB671_01378 | AB671_01511 | DNA mismatch repair protein MutL. | DNA topoisomerase 1. | 0.419 |
pcrA | mutL | AB671_00793 | AB671_01378 | ATP-dependent DNA helicase PcrA. | DNA mismatch repair protein MutL. | 0.943 |
pcrA | polA | AB671_00793 | AB671_04064 | ATP-dependent DNA helicase PcrA. | DNA polymerase I. | 0.853 |
pcrA | rarA | AB671_00793 | AB671_02111 | ATP-dependent DNA helicase PcrA. | Replication-associated recombination protein A. | 0.702 |
pcrA | recA | AB671_00793 | AB671_02910 | ATP-dependent DNA helicase PcrA. | Protein RecA. | 0.915 |
pcrA | recG | AB671_00793 | AB671_01769 | ATP-dependent DNA helicase PcrA. | ATP-dependent DNA helicase RecG. | 0.804 |
pcrA | recQ_3 | AB671_00793 | AB671_03514 | ATP-dependent DNA helicase PcrA. | ATP-dependent DNA helicase RecQ. | 0.924 |
pcrA | sbcD | AB671_00793 | AB671_02030 | ATP-dependent DNA helicase PcrA. | Nuclease SbcCD subunit D. | 0.649 |
pcrA | topA | AB671_00793 | AB671_01511 | ATP-dependent DNA helicase PcrA. | DNA topoisomerase 1. | 0.783 |
pcrA | topB_1 | AB671_00793 | AB671_00654 | ATP-dependent DNA helicase PcrA. | DNA topoisomerase 3. | 0.556 |
pcrA | topB_2 | AB671_00793 | AB671_01146 | ATP-dependent DNA helicase PcrA. | DNA topoisomerase 3. | 0.556 |
polA | mutL | AB671_04064 | AB671_01378 | DNA polymerase I. | DNA mismatch repair protein MutL. | 0.999 |
polA | pcrA | AB671_04064 | AB671_00793 | DNA polymerase I. | ATP-dependent DNA helicase PcrA. | 0.853 |
polA | rarA | AB671_04064 | AB671_02111 | DNA polymerase I. | Replication-associated recombination protein A. | 0.576 |
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