STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AB675_6936Uroporphyrinogen decarboxylase. (292 aa)    
Predicted Functional Partners:
AB675_11500
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
 
 
 0.987
AB675_9892
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
 
  
 0.958
AB675_5745
Oxygen-dependent coproporphyrinogen-III oxidase.
  
 0.915
AB675_11612
Uncharacterized protein.
  
 
 0.893
AB675_8376
Putative uroporphyrinogen-III C-methyltransferase; Belongs to the precorrin methyltransferase family.
    
 0.887
AB675_9423
Siroheme biosynthesis protein met8.
    
 0.884
AB675_2936
Putative glutamate synthase [NADPH].
    
 0.874
AB675_8552
Nitroreductase domain-containing protein.
     
 0.861
AB675_5727
Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
 
 
 0.800
AB675_306
Biotin synthase, mitochondrial.
    
 0.787
Your Current Organism:
Phialophora attae
NCBI taxonomy Id: 1664694
Other names: CBS 131958, P. attae, Phialophora attae Attili-Angelis, Duarte, Stielow & de Hoog, 2014
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