Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUM72555.1 | CUN07610.1 | ERS852572_00165 | ERS852572_01793 | Stage II sporulation protein P. | SpoIIIAH-like protein. | 0.860 |
CUM72555.1 | lytB | ERS852572_00165 | ERS852572_00288 | Stage II sporulation protein P. | Modifier protein of major autolysin. | 0.527 |
CUM72555.1 | spoIVA | ERS852572_00165 | ERS852572_00705 | Stage II sporulation protein P. | Stage IV sporulation protein A. | 0.831 |
CUM72555.1 | yabP | ERS852572_00165 | ERS852572_02038 | Stage II sporulation protein P. | Sporulation protein YabP. | 0.754 |
CUM75077.1 | lytB | ERS852572_00289 | ERS852572_00288 | YihY family inner membrane protein; Belongs to the UPF0761 family. | Modifier protein of major autolysin. | 0.702 |
CUN07610.1 | CUM72555.1 | ERS852572_01793 | ERS852572_00165 | SpoIIIAH-like protein. | Stage II sporulation protein P. | 0.860 |
CUN07610.1 | lytB | ERS852572_01793 | ERS852572_00288 | SpoIIIAH-like protein. | Modifier protein of major autolysin. | 0.504 |
CUN07610.1 | spoIVA | ERS852572_01793 | ERS852572_00705 | SpoIIIAH-like protein. | Stage IV sporulation protein A. | 0.625 |
CUN07610.1 | yabP | ERS852572_01793 | ERS852572_02038 | SpoIIIAH-like protein. | Sporulation protein YabP. | 0.417 |
CUN23064.1 | lytB | ERS852572_02672 | ERS852572_00288 | Putative glycogen debranching enzyme%2C archaeal type. | Modifier protein of major autolysin. | 0.500 |
dnaC_3 | lytB | ERS852572_02707 | ERS852572_00288 | DNA replication protein dnaC. | Modifier protein of major autolysin. | 0.461 |
dnaI_1 | lytB | ERS852572_02482 | ERS852572_00288 | Primosomal protein DnaI. | Modifier protein of major autolysin. | 0.461 |
dnaI_2 | lytB | ERS852572_03931 | ERS852572_00288 | Primosomal protein DnaI. | Modifier protein of major autolysin. | 0.461 |
lytB | CUM72555.1 | ERS852572_00288 | ERS852572_00165 | Modifier protein of major autolysin. | Stage II sporulation protein P. | 0.527 |
lytB | CUM75077.1 | ERS852572_00288 | ERS852572_00289 | Modifier protein of major autolysin. | YihY family inner membrane protein; Belongs to the UPF0761 family. | 0.702 |
lytB | CUN07610.1 | ERS852572_00288 | ERS852572_01793 | Modifier protein of major autolysin. | SpoIIIAH-like protein. | 0.504 |
lytB | CUN23064.1 | ERS852572_00288 | ERS852572_02672 | Modifier protein of major autolysin. | Putative glycogen debranching enzyme%2C archaeal type. | 0.500 |
lytB | dnaC_3 | ERS852572_00288 | ERS852572_02707 | Modifier protein of major autolysin. | DNA replication protein dnaC. | 0.461 |
lytB | dnaI_1 | ERS852572_00288 | ERS852572_02482 | Modifier protein of major autolysin. | Primosomal protein DnaI. | 0.461 |
lytB | dnaI_2 | ERS852572_00288 | ERS852572_03931 | Modifier protein of major autolysin. | Primosomal protein DnaI. | 0.461 |
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