STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUM80639.1Phosphoglycerol transferase and related proteins%2C alkaline phosphatase superfamily. (804 aa)    
Predicted Functional Partners:
CUM70274.1
ANTAR domain.
  
     0.593
CUN12308.1
Peptidylprolyl isomerase.
 
   
 0.559
CUM85230.1
Stage V sporulation protein K.
  
     0.522
CUM75543.1
Predicted O-linked N-acetylglucosamine transferase%2C SPINDLY family.
  
     0.520
CUM80617.1
Uncharacterised protein.
       0.481
CUN19018.1
Uncharacterised protein.
 
    0.464
CUM84395.1
Uncharacterised protein.
 
     0.430
ptpB
Low molecular weight protein-tyrosine-phosphatase ptpB.
 
   
 0.420
CUM74912.1
Chain length determinant protein tyrosine kinase EpsG.
  
     0.413
CUN12114.1
Uncharacterised protein.
  
     0.410
Your Current Organism:
Roseburia intestinalis
NCBI taxonomy Id: 166486
Other names: DSM 14610, NCIMB 13810, R. intestinalis, Roseburia intestinalis Duncan et al. 2002 emend. Duncan et al. 2006, strain L1-82
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.