STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUM81192.1Uncharacterised protein. (202 aa)    
Predicted Functional Partners:
CUM81207.1
Antirestriction protein (ArdA).
       0.831
CUM81241.1
Uncharacterised protein.
       0.584
CUM81174.1
Uncharacterised protein.
       0.572
CUM81223.1
Uncharacterised protein.
       0.561
dpnM
Modification methylase DpnIIA.
       0.557
CUM81277.1
Growth regulator.
       0.497
CUM81295.1
Transcriptional regulator%2C AbrB family.
       0.497
CUM81309.1
Uncharacterised protein.
       0.497
CUM81324.1
Uncharacterised protein.
       0.497
spoVG_1
Putative septation protein spoVG; Belongs to the SpoVG family.
       0.476
Your Current Organism:
Roseburia intestinalis
NCBI taxonomy Id: 166486
Other names: DSM 14610, NCIMB 13810, R. intestinalis, Roseburia intestinalis Duncan et al. 2002 emend. Duncan et al. 2006, strain L1-82
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.