STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUM81309.1Uncharacterised protein. (84 aa)    
Predicted Functional Partners:
CUM81277.1
Growth regulator.
       0.773
CUM81295.1
Transcriptional regulator%2C AbrB family.
       0.773
CUM81324.1
Uncharacterised protein.
       0.773
spoVG_1
Putative septation protein spoVG; Belongs to the SpoVG family.
       0.737
dpnM
Modification methylase DpnIIA.
       0.701
CUM81223.1
Uncharacterised protein.
       0.677
CUM81241.1
Uncharacterised protein.
       0.677
CUM81359.1
Uncharacterised protein.
       0.529
CUM81192.1
Uncharacterised protein.
       0.497
CUM81207.1
Antirestriction protein (ArdA).
       0.497
Your Current Organism:
Roseburia intestinalis
NCBI taxonomy Id: 166486
Other names: DSM 14610, NCIMB 13810, R. intestinalis, Roseburia intestinalis Duncan et al. 2002 emend. Duncan et al. 2006, strain L1-82
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.