Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUM81965.1 | CUM81986.1 | ERS852572_00631 | ERS852572_00632 | Putative two-component response-regulatory protein YehT. | Sensory histidine kinase DcuS. | 0.943 |
CUM81965.1 | CUM82003.1 | ERS852572_00631 | ERS852572_00633 | Putative two-component response-regulatory protein YehT. | DUF based on E. rectale Gene description. | 0.465 |
CUM81986.1 | CUM81965.1 | ERS852572_00632 | ERS852572_00631 | Sensory histidine kinase DcuS. | Putative two-component response-regulatory protein YehT. | 0.943 |
CUM81986.1 | CUM82003.1 | ERS852572_00632 | ERS852572_00633 | Sensory histidine kinase DcuS. | DUF based on E. rectale Gene description. | 0.468 |
CUM82003.1 | CUM81965.1 | ERS852572_00633 | ERS852572_00631 | DUF based on E. rectale Gene description. | Putative two-component response-regulatory protein YehT. | 0.465 |
CUM82003.1 | CUM81986.1 | ERS852572_00633 | ERS852572_00632 | DUF based on E. rectale Gene description. | Sensory histidine kinase DcuS. | 0.468 |
CUM82003.1 | CUM82029.1 | ERS852572_00633 | ERS852572_00634 | DUF based on E. rectale Gene description. | Uncharacterised protein. | 0.631 |
CUM82003.1 | CUM82045.1 | ERS852572_00633 | ERS852572_00635 | DUF based on E. rectale Gene description. | Uncharacterised protein. | 0.622 |
CUM82003.1 | CUM82334.1 | ERS852572_00633 | ERS852572_00649 | DUF based on E. rectale Gene description. | DUF based on E. rectale Gene description. | 0.646 |
CUM82029.1 | CUM82003.1 | ERS852572_00634 | ERS852572_00633 | Uncharacterised protein. | DUF based on E. rectale Gene description. | 0.631 |
CUM82029.1 | CUM82045.1 | ERS852572_00634 | ERS852572_00635 | Uncharacterised protein. | Uncharacterised protein. | 0.762 |
CUM82045.1 | CUM82003.1 | ERS852572_00635 | ERS852572_00633 | Uncharacterised protein. | DUF based on E. rectale Gene description. | 0.622 |
CUM82045.1 | CUM82029.1 | ERS852572_00635 | ERS852572_00634 | Uncharacterised protein. | Uncharacterised protein. | 0.762 |
CUM82334.1 | CUM82003.1 | ERS852572_00649 | ERS852572_00633 | DUF based on E. rectale Gene description. | DUF based on E. rectale Gene description. | 0.646 |