STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUM83614.1Uncharacterised ACR%2C YkgG family COG1556. (213 aa)    
Predicted Functional Partners:
porA
Pyruvate synthase subunit porA.
  
  
 0.849
gph
Phosphoglycolate phosphatase.
 
      0.572
porB
Pyruvate synthase subunit porB.
  
  
 0.569
CUM83630.1
Putative multidrug export ATP-binding/permease protein SAV1866.
       0.526
CUN27718.1
Uncharacterised protein.
    
   0.507
pyrK_1
Dihydrdoorotate oxidase B%2C electron transfer subunit.
  
   0.424
pyrK_2
Dihydrdoorotate oxidase B%2C electron transfer subunit; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+).
  
   0.424
CUN01063.1
Chitooligosaccharide deacetylase NodB.
  
    0.422
CUN08137.1
Uncharacterised protein.
  
  
 0.403
Your Current Organism:
Roseburia intestinalis
NCBI taxonomy Id: 166486
Other names: DSM 14610, NCIMB 13810, R. intestinalis, Roseburia intestinalis Duncan et al. 2002 emend. Duncan et al. 2006, strain L1-82
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.