STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUM84768.1Uncharacterised protein. (66 aa)    
Predicted Functional Partners:
CUM84786.1
Type IV leader peptidase family.
       0.773
CUM84807.1
Uncharacterised protein.
       0.697
CUM84827.1
Uncharacterised protein.
       0.697
CUM84845.1
Uncharacterised protein.
       0.697
CUM84751.1
Uncharacterized conserved protein%2C contains FHA domain.
       0.642
CUM84866.1
Flp pilus assembly protein TadB.
       0.499
CUM84885.1
Flp pilus assembly protein TadB.
       0.489
ptlH
Pertussis toxin liberation protein H.
       0.489
CUM84926.1
Uncharacterised protein.
       0.489
CUM84948.1
Flp pilus assembly protein%2C protease CpaA.
       0.489
Your Current Organism:
Roseburia intestinalis
NCBI taxonomy Id: 166486
Other names: DSM 14610, NCIMB 13810, R. intestinalis, Roseburia intestinalis Duncan et al. 2002 emend. Duncan et al. 2006, strain L1-82
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.