STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUM91988.1Cell division protein ZapA. (156 aa)    
Predicted Functional Partners:
ftsW_2
Cell division protein FtsW; Belongs to the SEDS family.
 
   
 0.831
pbpA_2
Penicillin-binding protein A.
 
   
 0.803
CUN08319.1
Uncharacterised protein; Essential cell division protein.
  
   
 0.783
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
   
 
 0.778
CUM92097.1
Uncharacterised protein.
 
     0.765
CUM99675.1
Photosystem I assembly protein Ycf3.
  
     0.765
CUN32169.1
Colicin V production protein.
 
  
 0.764
CUN31463.1
DUF based on E. rectale Gene description.
  
     0.755
CUN32166.1
Uncharacterised protein.
  
     0.752
mecB
Adapter protein mecA 2.
  
     0.751
Your Current Organism:
Roseburia intestinalis
NCBI taxonomy Id: 166486
Other names: DSM 14610, NCIMB 13810, R. intestinalis, Roseburia intestinalis Duncan et al. 2002 emend. Duncan et al. 2006, strain L1-82
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.