Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUM92555.1 | CUM92594.1 | ERS852572_01122 | ERS852572_01124 | Uncharacterised protein. | L-xylulose 5-phosphate 3-epimerase. | 0.699 |
CUM92555.1 | CUM92613.1 | ERS852572_01122 | ERS852572_01125 | Uncharacterised protein. | Fibronectin type III domain. | 0.463 |
CUM92555.1 | pehA | ERS852572_01122 | ERS852572_01123 | Uncharacterised protein. | Endo-polygalacturonase precursor; Belongs to the glycosyl hydrolase 28 family. | 0.744 |
CUM92555.1 | xynB_2 | ERS852572_01122 | ERS852572_01120 | Uncharacterised protein. | Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. | 0.668 |
CUM92555.1 | xynB_3 | ERS852572_01122 | ERS852572_01121 | Uncharacterised protein. | Beta-xylosidase. | 0.668 |
CUM92594.1 | CUM92555.1 | ERS852572_01124 | ERS852572_01122 | L-xylulose 5-phosphate 3-epimerase. | Uncharacterised protein. | 0.699 |
CUM92594.1 | CUM92613.1 | ERS852572_01124 | ERS852572_01125 | L-xylulose 5-phosphate 3-epimerase. | Fibronectin type III domain. | 0.519 |
CUM92594.1 | pehA | ERS852572_01124 | ERS852572_01123 | L-xylulose 5-phosphate 3-epimerase. | Endo-polygalacturonase precursor; Belongs to the glycosyl hydrolase 28 family. | 0.941 |
CUM92594.1 | xynB_2 | ERS852572_01124 | ERS852572_01120 | L-xylulose 5-phosphate 3-epimerase. | Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. | 0.599 |
CUM92594.1 | xynB_3 | ERS852572_01124 | ERS852572_01121 | L-xylulose 5-phosphate 3-epimerase. | Beta-xylosidase. | 0.590 |
CUM92613.1 | CUM92555.1 | ERS852572_01125 | ERS852572_01122 | Fibronectin type III domain. | Uncharacterised protein. | 0.463 |
CUM92613.1 | CUM92594.1 | ERS852572_01125 | ERS852572_01124 | Fibronectin type III domain. | L-xylulose 5-phosphate 3-epimerase. | 0.519 |
CUM92613.1 | pehA | ERS852572_01125 | ERS852572_01123 | Fibronectin type III domain. | Endo-polygalacturonase precursor; Belongs to the glycosyl hydrolase 28 family. | 0.483 |
CUM92613.1 | xynB_2 | ERS852572_01125 | ERS852572_01120 | Fibronectin type III domain. | Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. | 0.407 |
CUM92613.1 | xynB_3 | ERS852572_01125 | ERS852572_01121 | Fibronectin type III domain. | Beta-xylosidase. | 0.407 |
pehA | CUM92555.1 | ERS852572_01123 | ERS852572_01122 | Endo-polygalacturonase precursor; Belongs to the glycosyl hydrolase 28 family. | Uncharacterised protein. | 0.744 |
pehA | CUM92594.1 | ERS852572_01123 | ERS852572_01124 | Endo-polygalacturonase precursor; Belongs to the glycosyl hydrolase 28 family. | L-xylulose 5-phosphate 3-epimerase. | 0.941 |
pehA | CUM92613.1 | ERS852572_01123 | ERS852572_01125 | Endo-polygalacturonase precursor; Belongs to the glycosyl hydrolase 28 family. | Fibronectin type III domain. | 0.483 |
pehA | xynB_2 | ERS852572_01123 | ERS852572_01120 | Endo-polygalacturonase precursor; Belongs to the glycosyl hydrolase 28 family. | Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. | 0.863 |
pehA | xynB_3 | ERS852572_01123 | ERS852572_01121 | Endo-polygalacturonase precursor; Belongs to the glycosyl hydrolase 28 family. | Beta-xylosidase. | 0.771 |
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