STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUM93501.1Uncharacterized protein conserved in bacteria. (357 aa)    
Predicted Functional Partners:
CUN02257.1
Uncharacterized protein conserved in bacteria.
  
     0.707
CUN25686.1
FtsX-like permease family.
  
     0.628
CUM93466.1
Divergent AAA domain.
       0.623
CUM93483.1
Uncharacterised protein.
       0.623
CUN20821.1
Uncharacterised protein.
  
     0.581
CUN04282.1
Creatinine amidohydrolase.
  
     0.549
flr_3
Flavoredoxin.
  
     0.478
CUN04257.1
Predicted metal-dependent hydrolase of the TIM-barrel fold.
 
     0.458
CUM93523.1
Uncharacterised protein.
       0.445
hisE
Phosphoribosyl-ATP pyrophosphatase; In the C-terminal section; belongs to the PRA-PH family.
       0.440
Your Current Organism:
Roseburia intestinalis
NCBI taxonomy Id: 166486
Other names: DSM 14610, NCIMB 13810, R. intestinalis, Roseburia intestinalis Duncan et al. 2002 emend. Duncan et al. 2006, strain L1-82
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.