Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUM96907.1 | CUM96949.1 | ERS852572_01327 | ERS852572_01329 | Uncharacterised protein. | Plasmid recombination enzyme. | 0.416 |
CUM96907.1 | CUM96969.1 | ERS852572_01327 | ERS852572_01330 | Uncharacterised protein. | Uncharacterised protein. | 0.501 |
CUM96949.1 | CUM96907.1 | ERS852572_01329 | ERS852572_01327 | Plasmid recombination enzyme. | Uncharacterised protein. | 0.416 |
CUM96949.1 | CUM96969.1 | ERS852572_01329 | ERS852572_01330 | Plasmid recombination enzyme. | Uncharacterised protein. | 0.710 |
CUM96949.1 | bin3 | ERS852572_01329 | ERS852572_01331 | Plasmid recombination enzyme. | Putative transposon Tn552 DNA-invertase bin3. | 0.471 |
CUM96969.1 | CUM96907.1 | ERS852572_01330 | ERS852572_01327 | Uncharacterised protein. | Uncharacterised protein. | 0.501 |
CUM96969.1 | CUM96949.1 | ERS852572_01330 | ERS852572_01329 | Uncharacterised protein. | Plasmid recombination enzyme. | 0.710 |
CUM96969.1 | CUM97039.1 | ERS852572_01330 | ERS852572_01333 | Uncharacterised protein. | Eco57I restriction-modification methylase. | 0.406 |
CUM96969.1 | CUM97063.1 | ERS852572_01330 | ERS852572_01334 | Uncharacterised protein. | Uncharacterised protein. | 0.445 |
CUM96969.1 | CUN20778.1 | ERS852572_01330 | ERS852572_02474 | Uncharacterised protein. | Plasmid recombination enzyme. | 0.476 |
CUM96969.1 | CUN20785.1 | ERS852572_01330 | ERS852572_02475 | Uncharacterised protein. | Uncharacterised protein. | 0.586 |
CUM96969.1 | bin3 | ERS852572_01330 | ERS852572_01331 | Uncharacterised protein. | Putative transposon Tn552 DNA-invertase bin3. | 0.587 |
CUM96969.1 | immR_5 | ERS852572_01330 | ERS852572_02477 | Uncharacterised protein. | HTH-type transcriptional regulator immR. | 0.423 |
CUM96969.1 | mobA_3 | ERS852572_01330 | ERS852572_03171 | Uncharacterised protein. | DNA strand transferase. | 0.463 |
CUM97039.1 | CUM96969.1 | ERS852572_01333 | ERS852572_01330 | Eco57I restriction-modification methylase. | Uncharacterised protein. | 0.406 |
CUM97039.1 | CUM97063.1 | ERS852572_01333 | ERS852572_01334 | Eco57I restriction-modification methylase. | Uncharacterised protein. | 0.994 |
CUM97039.1 | bin3 | ERS852572_01333 | ERS852572_01331 | Eco57I restriction-modification methylase. | Putative transposon Tn552 DNA-invertase bin3. | 0.439 |
CUM97063.1 | CUM96969.1 | ERS852572_01334 | ERS852572_01330 | Uncharacterised protein. | Uncharacterised protein. | 0.445 |
CUM97063.1 | CUM97039.1 | ERS852572_01334 | ERS852572_01333 | Uncharacterised protein. | Eco57I restriction-modification methylase. | 0.994 |
CUM97063.1 | bin3 | ERS852572_01334 | ERS852572_01331 | Uncharacterised protein. | Putative transposon Tn552 DNA-invertase bin3. | 0.462 |
page 1 of 2