STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUN07627.1Stage III sporulation protein AG. (201 aa)    
Predicted Functional Partners:
CUN07610.1
SpoIIIAH-like protein.
 
  
 0.999
spoIIIAE
Stage III sporulation protein AE precursor.
 
  
 0.982
CUN07686.1
Stage III sporulation protein AD.
 
  
 0.975
spoIIIAA
Uncharacterized protein conserved in bacteria.
 
  
 0.974
CUN07647.1
Stage III sporulation protein AF.
  
  
 0.969
spoIIIAC
Stage III sporulation protein AC.
 
  
 0.956
CUN07723.1
Stage III sporulation protein SpoAB.
  
  
 0.905
spoIVA
Stage IV sporulation protein A.
  
  
 0.848
spoIIID
14 kDa transcription factor.
  
  
 0.836
spoIIE
Stage II sporulation protein E.
  
   
 0.801
Your Current Organism:
Roseburia intestinalis
NCBI taxonomy Id: 166486
Other names: DSM 14610, NCIMB 13810, R. intestinalis, Roseburia intestinalis Duncan et al. 2002 emend. Duncan et al. 2006, strain L1-82
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.