STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUN08120.1Uncharacterized protein conserved in bacteria. (605 aa)    
Predicted Functional Partners:
CUN08088.1
Predicted membrane protein.
       0.792
tagE
Probable poly(glycerol-phosphate) alpha-glucosyltransferase.
  
    0.786
CUN08103.1
Colanic acid biosynthesis glycosyltransferase WcaL.
  
    0.786
CUN08069.1
Uncharacterised protein.
       0.773
CUN08153.1
Uncharacterised protein.
  
    0.667
CUN08022.1
Uncharacterised protein.
       0.642
CUN08037.1
N-glycosyltransferase.
       0.642
CUN08137.1
Uncharacterised protein.
       0.630
CUN08168.1
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
  
    0.622
hyaD_2
Hyaluronan synthase.
       0.602
Your Current Organism:
Roseburia intestinalis
NCBI taxonomy Id: 166486
Other names: DSM 14610, NCIMB 13810, R. intestinalis, Roseburia intestinalis Duncan et al. 2002 emend. Duncan et al. 2006, strain L1-82
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.