STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
luxQAutoinducer 2 sensor kinase/phosphatase luxQ. (452 aa)    
Predicted Functional Partners:
cph2_7
Bacteriophytochrome cph2.
 
0.994
cph2_1
Bacteriophytochrome cph2.
 
 0.989
pleD
Stalked cell differentiation-controlling protein.
 
 0.983
gmr_4
Cyclic di-GMP phosphodiesterase Gmr.
 
 0.981
CUN26992.1
Aerobic respiration control sensor protein ArcB.
 
 
0.981
phoP_1
Alkaline phosphatase synthesis transcriptional regulatory protein phoP.
 
 
0.980
gmr_8
Cyclic di-GMP phosphodiesterase Gmr.
 
 0.979
cheV
Chemotaxis protein CheV.
 
 
 0.977
cheR
Chemotaxis protein methyltransferase.
  
 0.972
cph2_5
Bacteriophytochrome cph2.
 
 0.965
Your Current Organism:
Roseburia intestinalis
NCBI taxonomy Id: 166486
Other names: DSM 14610, NCIMB 13810, R. intestinalis, Roseburia intestinalis Duncan et al. 2002 emend. Duncan et al. 2006, strain L1-82
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.