STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spoVG_2Stage V sporulation protein G; Belongs to the SpoVG family. (227 aa)    
Predicted Functional Partners:
CUN11370.1
Invasion associated secreted endopeptidase.
 
     0.793
CUN32744.1
Protein of uncharacterised function (DUF3801).
  
     0.755
CUN32452.1
Uncharacterised protein.
 
     0.744
CUN32363.1
Uncharacterised protein.
 
     0.742
CUN32447.1
PrgI family protein.
  
     0.739
CUN11443.1
DNA methylase.
 
     0.730
spoVG_3
Putative septation protein spoVG; Could be involved in septation.
  
     0.728
CUN11476.1
Uncharacterised protein.
       0.720
CUN32356.1
PrgI family protein.
  
     0.716
CUN11456.1
Sortase (surface protein transpeptidase).
       0.698
Your Current Organism:
Roseburia intestinalis
NCBI taxonomy Id: 166486
Other names: DSM 14610, NCIMB 13810, R. intestinalis, Roseburia intestinalis Duncan et al. 2002 emend. Duncan et al. 2006, strain L1-82
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.