STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUN17604.1SirA-like protein; Belongs to the sulfur carrier protein TusA family. (83 aa)    
Predicted Functional Partners:
thiS-2
Bifunctional sulfur carrier protein/thiazole synthase protein.
 
 
 
 0.935
moeZ
Probable adenylyltransferase/sulfurtransferase MoeZ.
 
   
 0.926
mec
CysO-cysteine peptidase.
 
     0.920
dsvB
Sulfite reductase%2C dissimilatory-type subunit beta; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
   
 0.887
trxA_1
Thioredoxin-1; Belongs to the thioredoxin family.
       0.775
iscS_1
Cysteine desulfurase.
   
 
 0.750
nifS_1
Cysteine desulfurase.
   
 
 0.750
nifS_2
Cysteine desulfurase; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily.
   
 
 0.750
nadB_2
L-aspartate oxidase.
 
   
 0.476
porA
Pyruvate synthase subunit porA.
   
 
 0.437
Your Current Organism:
Roseburia intestinalis
NCBI taxonomy Id: 166486
Other names: DSM 14610, NCIMB 13810, R. intestinalis, Roseburia intestinalis Duncan et al. 2002 emend. Duncan et al. 2006, strain L1-82
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