Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CUN20834.1 | xerC_3 | ERS852572_02479 | ERS852572_02480 | Predicted ATPase. | Tyrosine recombinase XerC; Belongs to the 'phage' integrase family. | 0.556 |
| mfd | recR | ERS852572_02015 | ERS852572_03834 | Transcription-repair-coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. | 0.528 |
| mfd | spoIIIE | ERS852572_02015 | ERS852572_00316 | Transcription-repair-coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | Stage III sporulation protein E. | 0.533 |
| mfd | xerC_3 | ERS852572_02015 | ERS852572_02480 | Transcription-repair-coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | Tyrosine recombinase XerC; Belongs to the 'phage' integrase family. | 0.435 |
| recR | mfd | ERS852572_03834 | ERS852572_02015 | Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. | Transcription-repair-coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | 0.528 |
| recR | spoIIIE | ERS852572_03834 | ERS852572_00316 | Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. | Stage III sporulation protein E. | 0.405 |
| recR | xerC_3 | ERS852572_03834 | ERS852572_02480 | Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. | Tyrosine recombinase XerC; Belongs to the 'phage' integrase family. | 0.413 |
| spoIIIE | mfd | ERS852572_00316 | ERS852572_02015 | Stage III sporulation protein E. | Transcription-repair-coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | 0.533 |
| spoIIIE | recR | ERS852572_00316 | ERS852572_03834 | Stage III sporulation protein E. | Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. | 0.405 |
| spoIIIE | xerC_3 | ERS852572_00316 | ERS852572_02480 | Stage III sporulation protein E. | Tyrosine recombinase XerC; Belongs to the 'phage' integrase family. | 0.585 |
| xerC_3 | CUN20834.1 | ERS852572_02480 | ERS852572_02479 | Tyrosine recombinase XerC; Belongs to the 'phage' integrase family. | Predicted ATPase. | 0.556 |
| xerC_3 | mfd | ERS852572_02480 | ERS852572_02015 | Tyrosine recombinase XerC; Belongs to the 'phage' integrase family. | Transcription-repair-coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | 0.435 |
| xerC_3 | recR | ERS852572_02480 | ERS852572_03834 | Tyrosine recombinase XerC; Belongs to the 'phage' integrase family. | Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. | 0.413 |
| xerC_3 | spoIIIE | ERS852572_02480 | ERS852572_00316 | Tyrosine recombinase XerC; Belongs to the 'phage' integrase family. | Stage III sporulation protein E. | 0.585 |