STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUN21278.1Uncharacterised protein. (188 aa)    
Predicted Functional Partners:
CUN21301.1
Domain of uncharacterised function (DUF955).
 
     0.889
immR_6
HTH-type transcriptional regulator immR.
 
     0.878
CUM81763.1
Domain of uncharacterised function (DUF3846).
  
     0.689
CUN21735.1
Domain of uncharacterised function (DUF3846).
  
     0.658
CUM81505.1
Uncharacterised protein.
  
     0.657
CUM81474.1
Flp pilus assembly protein TadB.
  
     0.643
CUM81490.1
Uncharacterised protein.
  
     0.638
CUM81535.1
Uncharacterised protein.
  
     0.630
CUM81207.1
Antirestriction protein (ArdA).
  
     0.621
CUM81429.1
Flp pilus assembly protein%2C ATPase CpaE.
  
     0.614
Your Current Organism:
Roseburia intestinalis
NCBI taxonomy Id: 166486
Other names: DSM 14610, NCIMB 13810, R. intestinalis, Roseburia intestinalis Duncan et al. 2002 emend. Duncan et al. 2006, strain L1-82
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.