STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUN21499.1Uncharacterised protein. (149 aa)    
Predicted Functional Partners:
CUN21508.1
Uncharacterised protein.
       0.709
flr_3
Flavoredoxin.
       0.697
CUN21477.1
Polyketide cyclase / dehydrase and lipid transport.
       0.657
CUN21464.1
Uncharacterised protein.
       0.585
CUN21516.1
Uncharacterised protein.
       0.567
drrA_2
Daunorubicin/doxorubicin resistance ATP-binding protein DrrA.
       0.567
CUN21537.1
Uncharacterised protein.
       0.559
CUN21549.1
Anaerobic benzoate catabolism transcriptional regulator.
       0.559
CUN21443.1
DNA alkylation repair enzyme.
       0.543
CUN21454.1
Protein of uncharacterised function (DUF3795).
       0.543
Your Current Organism:
Roseburia intestinalis
NCBI taxonomy Id: 166486
Other names: DSM 14610, NCIMB 13810, R. intestinalis, Roseburia intestinalis Duncan et al. 2002 emend. Duncan et al. 2006, strain L1-82
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.