STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUN26466.1Putative multidrug export ATP-binding/permease protein SAV1866. (575 aa)    
Predicted Functional Partners:
macB_3
Macrolide export ATP-binding/permease protein MacB.
 
     
0.893
macB_4
Macrolide export ATP-binding/permease protein MacB.
 
     
0.892
lolD_2
Lipoprotein-releasing system ATP-binding protein LolD.
 
     
0.892
artM
Arginine transport ATP-binding protein ArtM.
 
     
0.888
macB_10
Macrolide export ATP-binding/permease protein MacB.
 
     
0.885
macB_12
Macrolide export ATP-binding/permease protein MacB.
 
     
0.857
macB_13
Macrolide export ATP-binding/permease protein MacB.
 
     
0.852
yheH_1
Probable multidrug resistance ABC transporter ATP-binding/permease protein YheH.
 
    
0.823
slyA_2
Salmolysin.
 
   
 0.810
phnC
Phosphate-import ATP-binding protein PhnC; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
 
     
0.769
Your Current Organism:
Roseburia intestinalis
NCBI taxonomy Id: 166486
Other names: DSM 14610, NCIMB 13810, R. intestinalis, Roseburia intestinalis Duncan et al. 2002 emend. Duncan et al. 2006, strain L1-82
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