STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUN29094.1PrgI family protein. (134 aa)    
Predicted Functional Partners:
CUN29089.1
Type IV secretory pathway%2C VirB4 components.
     0.951
iap_4
Probable endopeptidase p60 precursor.
 
     0.877
yhdJ
DNA adenine methyltransferase YhdJ; Belongs to the N(4)/N(6)-methyltransferase family.
 
     0.837
CUN25894.1
Type IV secretory pathway%2C VirB4 components.
     0.829
CUN21091.1
Maff2 family.
 
     0.786
CUN29068.1
Uncharacterised protein.
 
     0.785
CUN32489.1
Uncharacterised protein.
 
     0.780
CUN21112.1
Protein of uncharacterised function (DUF3801).
  
     0.769
CUN13765.1
Protein of uncharacterised function (DUF3801).
 
     0.756
CUN13780.1
Type IV secretion system protein VirD4.
 
     0.735
Your Current Organism:
Roseburia intestinalis
NCBI taxonomy Id: 166486
Other names: DSM 14610, NCIMB 13810, R. intestinalis, Roseburia intestinalis Duncan et al. 2002 emend. Duncan et al. 2006, strain L1-82
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.