Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUN01740.1 | guaA | ERS852572_01524 | ERS852572_01319 | Uncharacterised protein. | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | 0.602 |
CUN01740.1 | nrdG | ERS852572_01524 | ERS852572_03382 | Uncharacterised protein. | Anaerobic ribonucleotide reductase-activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine. | 0.792 |
CUN29661.1 | CUN29666.1 | ERS852572_03378 | ERS852572_03379 | Uncharacterised protein. | DUF218 domain. | 0.752 |
CUN29661.1 | araR_3 | ERS852572_03378 | ERS852572_03381 | Uncharacterised protein. | Arabinose metabolism transcriptional repressor. | 0.517 |
CUN29661.1 | nrdD | ERS852572_03378 | ERS852572_03375 | Uncharacterised protein. | Anaerobic ribonucleoside-triphosphate reductase. | 0.483 |
CUN29661.1 | nrdG | ERS852572_03378 | ERS852572_03382 | Uncharacterised protein. | Anaerobic ribonucleotide reductase-activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine. | 0.517 |
CUN29661.1 | rnhA | ERS852572_03378 | ERS852572_03380 | Uncharacterised protein. | Ribonuclease H. | 0.568 |
CUN29661.1 | zupT | ERS852572_03378 | ERS852572_03377 | Uncharacterised protein. | Zinc transporter ZupT. | 0.737 |
CUN29666.1 | CUN29661.1 | ERS852572_03379 | ERS852572_03378 | DUF218 domain. | Uncharacterised protein. | 0.752 |
CUN29666.1 | araR_3 | ERS852572_03379 | ERS852572_03381 | DUF218 domain. | Arabinose metabolism transcriptional repressor. | 0.530 |
CUN29666.1 | nrdD | ERS852572_03379 | ERS852572_03375 | DUF218 domain. | Anaerobic ribonucleoside-triphosphate reductase. | 0.488 |
CUN29666.1 | nrdG | ERS852572_03379 | ERS852572_03382 | DUF218 domain. | Anaerobic ribonucleotide reductase-activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine. | 0.534 |
CUN29666.1 | rnhA | ERS852572_03379 | ERS852572_03380 | DUF218 domain. | Ribonuclease H. | 0.584 |
CUN29666.1 | zupT | ERS852572_03379 | ERS852572_03377 | DUF218 domain. | Zinc transporter ZupT. | 0.724 |
CUN29681.1 | araR_3 | ERS852572_03383 | ERS852572_03381 | Uncharacterised protein. | Arabinose metabolism transcriptional repressor. | 0.512 |
CUN29681.1 | nrdG | ERS852572_03383 | ERS852572_03382 | Uncharacterised protein. | Anaerobic ribonucleotide reductase-activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine. | 0.512 |
CUN29681.1 | rnhA | ERS852572_03383 | ERS852572_03380 | Uncharacterised protein. | Ribonuclease H. | 0.467 |
araR_3 | CUN29661.1 | ERS852572_03381 | ERS852572_03378 | Arabinose metabolism transcriptional repressor. | Uncharacterised protein. | 0.517 |
araR_3 | CUN29666.1 | ERS852572_03381 | ERS852572_03379 | Arabinose metabolism transcriptional repressor. | DUF218 domain. | 0.530 |
araR_3 | CUN29681.1 | ERS852572_03381 | ERS852572_03383 | Arabinose metabolism transcriptional repressor. | Uncharacterised protein. | 0.512 |
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