STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tagH_3Teichoic acids export ATP-binding protein TagH. (522 aa)    
Predicted Functional Partners:
kpsM_2
Polysialic acid transport protein kpsM.
 
 
 0.992
kpsM_1
Polysialic acid transport protein kpsM.
 
 
 0.967
CUN05555.1
ABC-2 type transporter.
 
 
 0.966
hyaD_1
Hyaluronan synthase.
 
  
 0.794
kfoC_2
Chondroitin polymerase.
 
  
 0.779
CUN31913.1
Uncharacterised protein.
       0.773
CUN31917.1
Uncharacterised protein.
       0.773
CUN31920.1
Uncharacterised protein.
       0.773
dltB_4
Predicted membrane protein; Belongs to the membrane-bound acyltransferase family.
       0.695
CUN31900.1
Uncharacterised protein.
       0.690
Your Current Organism:
Roseburia intestinalis
NCBI taxonomy Id: 166486
Other names: DSM 14610, NCIMB 13810, R. intestinalis, Roseburia intestinalis Duncan et al. 2002 emend. Duncan et al. 2006, strain L1-82
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.