STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPQ38214.1WD40 repeat protein. (199 aa)    
Predicted Functional Partners:
KPQ39270.1
Hypothetical protein.
     0.879
KPQ39708.1
Hypothetical protein.
    
  0.796
KPQ32137.1
Putative exonuclease of the beta-lactamase fold involved in RNA processing.
    
  0.766
hatR
High-affinity carbon uptake protein HatR.
 
     0.763
KPQ38215.1
WD40 repeat protein.
 
    
0.758
KPQ33727.1
Tetratricopeptide repeat/TPR repeat.
  
 
  0.699
KPQ38155.1
Tetratricopeptide repeat/Trypsin-like peptidase domain/TPR repeat.
 
 
  0.691
KPQ32601.1
TPR repeat/Hemolysin-type calcium-binding repeat (2 copies).
  
 
  0.690
KPQ32600.1
Tetratricopeptide repeat/TPR repeat/Hemolysin-type calcium-binding repeat (2 copies).
  
 
  0.689
KPQ32879.1
TPR repeat.
 
 
  0.686
Your Current Organism:
Phormidium sp. OSCR
NCBI taxonomy Id: 1666905
Other names: P. sp. OSCR
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.