STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fabG-43-oxoacyl-[acyl-carrier protein] reductase. (244 aa)    
Predicted Functional Partners:
fabH-2
3-oxoacyl-[acyl-carrier-protein] synthase III.
 
 
 0.917
fabF
Beta-ketoacyl-acyl-carrier-protein synthase II FabF; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 0.884
KPQ01008.1
fatty-acyl-CoA synthase.
  
 0.873
KPP95211.1
DNA repair exonuclease.
    
 
 0.864
queD
6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase QueD.
     
 0.851
fabD
Malonyl CoA-acyl carrier protein transacylase FabD.
 0.849
nifJ
Pyruvate-flavodoxin oxidoreductase NifJ.
    
 0.802
pir
FAD/FMN dehdrogenase with 4Fe4S domain.
  
 0.801
panF
Na+/panthothenate symporter PanF; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
       0.773
KPP94678.1
Glycosyl hydrolases family 2, TIM barrel domain.
   
 
 0.773
Your Current Organism:
Bacteroidetes bacterium HLUCCA01
NCBI taxonomy Id: 1666909
Other names: B. bacterium HLUCCA01
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