STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPP98670.1Protein of unknown function (DUF2851). (379 aa)    
Predicted Functional Partners:
KPQ00675.1
TPR repeat domain protein.
  
     0.697
KPP96119.1
Hypothetical protein.
  
     0.691
sprA
Type 9 secretion system outer membrane protein SprA.
  
     0.687
KPQ00636.1
Organic solvent tolerance protein OstA.
  
     0.675
KPP97554.1
Bacterial membrane protein YfhO.
  
     0.667
KPQ00796.1
Hypothetical protein.
  
     0.612
KPQ00623.1
Hypothetical protein.
  
     0.605
KPP95148.1
RNA polymerase Rpb6; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
     0.601
KPP98666.1
Protein of unknown function (DUF3078).
 
     0.561
KPQ00626.1
Hypothetical protein.
  
     0.549
Your Current Organism:
Bacteroidetes bacterium HLUCCA01
NCBI taxonomy Id: 1666909
Other names: B. bacterium HLUCCA01
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