STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPP96378.1Radical SAM enzyme with DUF3641 and 4Fe-4S domains. (349 aa)    
Predicted Functional Partners:
KPP96377.1
Gamma-carboxymuconolactone decarboxylase subunit-like protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
 
    0.884
KPP96379.1
Hypothetical protein.
 
     0.869
KPP96380.1
Putative glycosyltransferase.
 
     0.857
hemE
Uroporphyrinogen decarboxylase HemE; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
    
 0.697
KPP99509.1
Two-component signal transduction system histidine kinase.
     
 0.667
ribBA
Bifunctional 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.641
hemH
Ferrochelatase HemH; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
     
 0.613
KPP96391.1
Pullanase-type alpha-1,6-glucosidase; Belongs to the glycosyl hydrolase 13 family.
     
 0.604
KPQ00290.1
Two component signal transduction system histidine kinase with PAS and GAF sensory domains.
    
 0.571
nifJ
Pyruvate-flavodoxin oxidoreductase NifJ.
     
 0.569
Your Current Organism:
Bacteroidetes bacterium HLUCCA01
NCBI taxonomy Id: 1666909
Other names: B. bacterium HLUCCA01
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