STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUX79486.1Universal stress protein family protein. (279 aa)    
Predicted Functional Partners:
CUX81809.1
Hypothetical protein.
  
     0.729
ccoQ
Cytochrome c oxidase cbb3-type subunit 4.
 
  
 0.691
fnr
CRP/FNR family transcriptional regulator, anaerobic regulatory protein.
  
    0.684
ccoN
Cytochrome c oxidase cbb3-type subunit 1; Belongs to the heme-copper respiratory oxidase family.
  
    0.632
ccoO
Cytochrome c oxidase cbb3-type subunit 2.
  
  
 0.624
ccoP
Cytochrome c oxidase cbb3-type subunit 3; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
  
    0.582
CUX80102.1
Protein of unknown function (DUF2478).
  
     0.552
CUX81347.1
Hypothetical protein.
 
    0.538
hemN
Oxygen-independent coproporphyrinogen-3 oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
  
    0.537
CUX83457.1
Hypothetical protein.
  
     0.528
Your Current Organism:
Roseibaca calidilacus
NCBI taxonomy Id: 1666912
Other names: R. calidilacus, Rhodobacteraceae bacterium HL-91
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