STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccoICu2+-exporting ATPase. (724 aa)    
Predicted Functional Partners:
copA
Cu+-exporting ATPase.
 
 
0.986
ccoS
Cytochrome oxidase maturation protein, cbb3-type.
 
  
 0.972
ccoG
Cytochrome c oxidase accessory protein FixG.
 
  
 0.968
ccoH
Nitrogen fixation protein FixH.
 
   
 0.967
ccoP
Cytochrome c oxidase cbb3-type subunit 3; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
   
 0.794
ccoN
Cytochrome c oxidase cbb3-type subunit 1; Belongs to the heme-copper respiratory oxidase family.
 
   
 0.790
ccoO
Cytochrome c oxidase cbb3-type subunit 2.
 
   
 0.780
ccoQ
Cytochrome c oxidase cbb3-type subunit 4.
 
     0.547
CUX83949.1
Transcriptional regulator, ArsR family; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
  
 0.470
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 
 0.465
Your Current Organism:
Roseibaca calidilacus
NCBI taxonomy Id: 1666912
Other names: R. calidilacus, Rhodobacteraceae bacterium HL-91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.