STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUX79978.1Transglycosylase SLT domain-containing protein. (389 aa)    
Predicted Functional Partners:
CUX79977.1
Type IV secretion system protein VirB5.
 
    0.949
CUX79976.1
Type IV secretion system protein VirB8.
 
     0.944
CUX79971.1
Type IV secretion system protein VirB6.
 
     0.943
CUX79980.1
Type IV secretion system protein VirB4.
 
     0.942
CUX79981.1
Type IV secretion system protein VirB3.
 
     0.940
CUX79974.1
Type IV secretion system protein VirB10.
 
     0.937
CUX79975.1
Type IV secretion system protein VirB9.
 
     0.936
CUX79982.1
Type IV secretion system protein VirB2.
 
     0.933
CUX79973.1
Type IV secretion system protein VirB11.
 
    0.854
CUX79983.1
Transglycosylase SLT domain-containing protein.
 
    
0.837
Your Current Organism:
Roseibaca calidilacus
NCBI taxonomy Id: 1666912
Other names: R. calidilacus, Rhodobacteraceae bacterium HL-91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.