STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUX80014.1Hypothetical protein. (146 aa)    
Predicted Functional Partners:
soxX-2
Monoheme cytochrome SoxX (sulfur oxidation).
 
  
  0.806
soxD
Sulfur dehydrogenase subunit SoxD.
 
     0.799
soxA
Sulfur-oxidizing protein SoxA.
 
     0.795
soxY
Sulfur-oxidizing protein SoxY.
 
     0.780
soxW
Thioredoxin-related protein.
 
     0.773
soxZ
Sulfur-oxidizing protein SoxZ.
 
     0.767
CUX80794.1
Hypothetical protein.
  
     0.764
soxX
Hypothetical protein.
 
     0.759
soxB
Sulfate thiol esterase SoxB; Belongs to the 5'-nucleotidase family.
 
     0.741
soxC
Sulfur dehydrogenase subunit SoxC.
 
     0.725
Your Current Organism:
Roseibaca calidilacus
NCBI taxonomy Id: 1666912
Other names: R. calidilacus, Rhodobacteraceae bacterium HL-91
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.