STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uxuAD-mannonate dehydratase; Catalyzes the dehydration of D-mannonate. (405 aa)    
Predicted Functional Partners:
uxuB
Fructuronate reductase.
 
 0.996
uxaC
D-glucuronate isomerase.
 
  
 0.993
kdgK
2-dehydro-3-deoxygluconokinase.
 
  
 0.976
suyB
(2R)-sulfolactate sulfo-lyase subunit beta.
  
 
 0.915
malZ
Alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.
 
     0.815
hdhA
7-alpha-hydroxysteroid dehydrogenase.
 
 
  0.769
comC
(2R)-3-sulfolactate dehydrogenase (NADP+); Belongs to the LDH2/MDH2 oxidoreductase family.
  
    0.656
suyA
(2R)-sulfolactate sulfo-lyase subunit alpha.
  
 
 0.556
CUX79473.1
L-alanine-DL-glutamate epimerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
    
 0.553
eda
2-keto-3-deoxy-phosphogluconate aldolase.
 
   
 0.518
Your Current Organism:
Roseibaca calidilacus
NCBI taxonomy Id: 1666912
Other names: R. calidilacus, Rhodobacteraceae bacterium HL-91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.