STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
iorAIsoquinoline 1-oxidoreductase, alpha subunit. (152 aa)    
Predicted Functional Partners:
iorB
Isoquinoline 1-oxidoreductase, beta subunit.
 0.999
coxL
Xanthine dehydrogenase, molybdenum binding subunit apoprotein.
 0.998
coxM
Carbon-monoxide dehydrogenase medium subunit.
 
 0.984
xdhB
Xanthine dehydrogenase, molybdenum binding subunit apoprotein.
 
  
  0.968
xdhC
Xanthine dehydrogenase accessory factor.
 
 
 0.879
mocA-2
CTP:molybdopterin cytidylyltransferase MocA.
 
 
 0.821
maeB
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
   
 0.747
CUX82637.1
Salicylate hydroxylase.
  
 
 0.729
pncA
Nicotinamidase/pyrazinamidase.
    
  0.723
pcnB
Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family.
    
  0.695
Your Current Organism:
Roseibaca calidilacus
NCBI taxonomy Id: 1666912
Other names: R. calidilacus, Rhodobacteraceae bacterium HL-91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.