STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUX81154.1Putative oxidoreductase. (131 aa)    
Predicted Functional Partners:
CUX79919.1
Transcriptional regulator, ArsR family.
    
  0.641
soxD-2
Cytochrome c.
   
 
  0.636
soxC
Sulfur dehydrogenase subunit SoxC.
  
 
 0.539
selD
Selenide, water dikinase.
  
 
 0.532
pat
Phosphinothricin acetyltransferase.
       0.518
soxA
Sulfur-oxidizing protein SoxA.
    
  0.470
CUX81943.1
Cytochrome c, mono-and diheme variants.
  
  
  0.457
djlA
DnaJ like chaperone protein.
       0.454
CUX83155.1
Hypothetical protein.
  
 
  0.429
CUX84007.1
Hypothetical protein; Belongs to the pirin family.
  
  
 0.412
Your Current Organism:
Roseibaca calidilacus
NCBI taxonomy Id: 1666912
Other names: R. calidilacus, Rhodobacteraceae bacterium HL-91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.