STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUX81275.1Uncharacterized conserved protein YjbJ, UPF0337 family; Manually curated. (68 aa)    
Predicted Functional Partners:
CUX80162.1
Las17-binding protein actin regulator.
  
    0.895
CUX81276.1
Transposase InsO and inactivated derivatives.
       0.773
CUX81278.1
Transposase.
       0.773
CUX81273.1
Hypothetical protein.
       0.655
CUX80063.1
OsmC-like protein.
   
  
 0.606
CUX81746.1
Peroxiredoxin, Ohr subfamily.
   
  
 0.606
wza
Polysaccharide export outer membrane protein.
   
    0.576
wza-2
Polysaccharide export outer membrane protein.
   
    0.576
CUX81279.1
Hypothetical protein.
       0.572
CUX81281.1
Hypothetical protein.
       0.572
Your Current Organism:
Roseibaca calidilacus
NCBI taxonomy Id: 1666912
Other names: R. calidilacus, Rhodobacteraceae bacterium HL-91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.